(Rust rewrite)

Documentation

These help pages are from the original FastQC documentation. The Rust rewrite runs the same modules with the same behaviour.

Introduction

Analysis modules

  1. Basic Statistics
  2. Per Base Sequence Quality
  3. Per Sequence Quality Scores
  4. Per Base Sequence Content
  5. Per Sequence GC Content
  6. Per Base N Content
  7. Sequence Length Distribution
  8. Duplicate Sequences
  9. Overrepresented Sequences
  10. Adapter Content
  11. Kmer Content
  12. Per Tile Sequence Quality

Rust-rewrite features

These features are only available in the Rust rewrite, pending merge into the upstream Java project.